Ph.D., Chemistry and Physics (minor), California Institute of Technology, 2015
A.B. Hamilton College, 2008
Fulbright Scholar, Heinrich-Heine Univ, 2009
GCIS E028
929 East 57th Street
Chicago, IL 60637 USA
mallodi@engelgroup.uchicago.edu
(773)-702-6066
Chemistry happens at interfaces. Whether at the interface of solute and solvent, layers in a solar cell, or at a phospholipid bilayer differences in structure and dynamics at the interface will determine the outcome of chemical processes. My research aims to understand these differences and to use what we learn to control chemical outcomes. To observe molecular and excitonic dynamics on their native timescales (femtoseconds to picoseconds), we use ultrafast lasers that can resolve these events in time. For example, photosynthetic organisms transfer energy from photons absorbed in an antenna complex to a reaction center on a femtosecond time scale. However, in the presence of too much sunlight, plants absorb more photons than they can use and must dissipate this energy before it can damage the cell. Using ultrafast 2D electronic spectroscopy, we are working to understand these photoprotective processes in living cultures of cyanobacteria and green algae.
Some questions cannot be answered with existing techniques, and some aspects of my research have focused on technique development to provide these answers. One such example is resolving the dynamics of exactions at grain boundaries in solar cells. To correlate the structure with dynamics of materials on the meso- and nanoscale, I have been working to develop Optical Resonance Imaging (ORI) to provide sub-diffraction-limited, wide-field, ultrafast imaging. ORI maps space to time using temporal gradients in an analogous way to how MRI maps space to energy using magnetic-field gradients. With this technique, we will be able to visualize energy flow through a material and directly correlate dynamics with structure.
Born: 9/8/1986, New Hartford, NY, USA.
A.B. Hamilton College, 2008 (Advisor: George Shields)
Fulbright Scholar, Heinrich-Heine Univ, 2009
Ph.D. Caltech, 2015 (Advisor: Geoff Blake)
Postdoctoral Scholar, UChicago (Advisor: Greg Engel)
J.S. Higgins,* M.A. Allodi,* L.T. Lloyd, J.P. Otto, S.H. Sohail, R.G. Saer, R.E. Wood, S.C. Massey, P.-C. Ting, R.E. Blankenship, G.S. Engel, "Redox conditions correlated with vibronic coupling modulate quantum beats in photosynthetic pigment-protein complexes", PNAS 118 e2112817118 2021.
* These authors contributed equally
B.S. Rolczynski, S.-H. Yeh, P. Navotnaya, L.T. Lloyd, A.R. Ginzburg, H. Zheng, M.A. Allodi, J.P. Otto, K. Ashraf, A. Gardiner, R. Cogdell, S. Kais, and G.S. Engel, "Time-domain Line-shape Analysis from 2D Spectroscopy to Precisely Determine Hamiltonian Parameters for a Photosynthetic Complex", J. Phys. Chem. B 125 2812 2021.
J.S. Higgins, L.T. Lloyd, S.H. Sohail, M.A. Allodi, J.P. Otto, R.G. Saer, R.E. Wood, S.C. Massey, P.-C. Ting, R.E. Blankenship, and G.S. Engel, "Photosynthesis tunes quantum mechanical mixing of electronic and vibrational states to steer exciton energy transfer", PNAS 118 e2018240118 2021.
L.T. Lloyd, R.E. Wood, M.A. Allodi, S. Sohoni, J.S. Higgins, J.P. Otto, and G.S Engel, "Leveraging scatter in two-dimensional spectroscopy: passive phase drift correction enables a global phasing protocol", Optics Express 28, 32869-328 2020.
S.H. Sohail, J.P. Otto, P.D. Cunningham, Y.C. Kim, R.E. Wood, M.A. Allodi, J.S. Higgins, J.S. Melinger, and G.S. Engel, "DNA scaffold supports long-lived vibronic coherence in an indodicarbocyanine (Cy5) dimer", Chemical Science 11, 8546-8557 2020.
R.E Wood,* L.T. Lloyd,* F. Mujid, L. Wang, M.A. Allodi, H. Gao, R.J. Mazuski, P.-C. Ting, S. Xie, J. Park, and G.S. Engel, "Evidence for the Dominance of Carrier-Induced Band Gap Renormalization over Biexciton Formation in Cryogenic Ultrafast Experiments on MoS2 Monolayers", J. Phys. Chem. Lett. 11, 2658-2666 2020.
* These authors contributed equally
R.E Wood, L.T. Lloyd, F. Mujid, L. Wang, M.A. Allodi, H. Gao, R.J. Mazuski, P.-C. Ting, S. Xie, J. Park, and G.S. Engel, "Biexcitons do not form in MoS2 monolayers from optical pumping at 6 K", Ultrafast Phenomena and Nanophotonics XXIV 11278, 1127805
S-H Yeh, R. Hoehn, M.A. Allodi, G.S. Engel, and S. Kais, "Elucidation of near-resonance vibronic coherence lifetimes by nonadiabatic electronic-vibrational state character mixing", PNAS 116 18263-18268 2019.
L. Wang*, M.A. Allodi* and G.S. Engel, "Quantum coherences reveal excited state dynamics in biophysical systems", Nat. Rev. Chem. 3 477–490 2019.
* These authors contributed equally
S.C. Massey, P.-C. Ting, S.-H. Yeh, P.D. Dahlberg, S.H. Sohail, M.A. Allodi, E.C. Martin, S. Kais, C.N. Hunter, and G.S. Engel, "Orientational Dynamics of Transition Dipoles and Exciton Relaxation in LH2 from Ultrafast Two-Dimensional Anisotropy", JPCL, 10 270–277 2019.
M.A. Allodi, J.P. Otto, S.H. Sohail, R.G. Saer, R.E. Wood, B.S. Rolczynski, S.C. Massey, P.-C. Ting, R.E. Blankenship, and G.S. Engel, "Redox Conditions Affect Ultrafast Exciton Transport in Photosynthetic Pigment-Protein Complexes", J. Phys. Chem. Lett. 9, 89-95 2018.
P.D. Dahlberg, P.-C. Ting, S.C. Massey, M.A. Allodi, E.C. Martin, C.N. Hunter, and G.S. Engel, "Mapping the ultrafast flow of harvested solar energy in living photosynthetic cells", Nat. Comm. 8, 988 2017.
S.H. Sohail,* P.D. Dahlberg,* M.A. Allodi, S.C. Massey, P.-C. Ting, E.C. Martin, C.N. Hunter, and G.S. Engel, "Communication: Broad Manifold of Excitonic States in Light-Harvesting Complex 1 Promotes Efficient Unidirectional Energy Transfer in vivo", J. Chem. Phys 147, 131101 2017.
* These authors contributed equally
M.A. Allodi, P.D. Dahlberg, R.J. Mazuski, H.C. Davis, J.P. Otto, and G.S. Engel, "Optical resonance imaging: An optical analog to MRI with sub-diffraction-limited capabilities", ACS Photonics 3, 2445–2452 2016.
Congratulations to Jake Higgins, Marco Allodi, Lawson Lloyd, John Otto, Sara Sohail, Ryan Wood, Sara Massey, and Po-Chieh Ting as well as our collaborators in the Blankenship Group on having their paper entitled, "Redox conditions correlated with vibronic coupling modulate quantum beats in photosynthetic pigment-protein complexes" published in PNAS.
Congratulations to Jake Higgins, Lawson Lloyd, Sara Sohail, Marco Allodi, John Otto, Ryan Wood, Po-Chieh Ting and our collaborators in the Blankenship Group on their paper being published in PNAS. The paper is entitled, "Photosynthesis tunes quantum mechanical mixing of electronic and vibrational states to steer exciton energy transfer".
Congratulations to Brian Rolczynski, Shu-Hao Yeh, Polina Navotnaya, Lawson Lloyd, Ruvim Ginzburg, Haibin Zheng, Marco Allodi, John Otto and our collaborators in the Cogdell and Kais Groups on their paper entitled, "Time-domain Line-shape Analysis from 2D Spectroscopy to Precisely Determine Hamiltonian Parameters for a Photosynthetic Complex" being accepted to J. Phys Chem B.
Congratulations to Marco Allodi on starting his new position at Bain and Co. Good luck, Marco!
Congratulations to Lawson Lloyd, Ryan Wood, Marco Allodi, Sid Sohoni, Jake Higgins, and John Otto on their paper entitled, "Leveraging scatter in two-dimensional spectroscopy: passive phase drift correction enables a global phasing protocol," being published in Optics Express.
Sara Sohail, John Otto, Ryan Wood, Marco Allodi, and Jake Higgins have had their paper entitled "DNA scaffold supports long-lived vibronic coherence in an indodicarbocyanine (Cy5) dimer" has been accepted to Chemical Science. The paper was written in collaboration with Joe Melinger, Paul Cunningham and Youngchan Kim at NRL.
Congratulations to Ryan Wood, Lawson Lloyd, Lili Wang, Marco Allodi, Richard Mazuski, Po-Chieh Ting and our collaborators in the Park Group on the publication in JPCL of their paper entitled "Evidence for the Dominance of Carrier-Induced Band Gap Renormalization over Biexciton Formation in Cryogenic Ultrafast Experiments on MoS2 Monolayers".
Congratulations to Ryan Wood, Lawson Lloyd, Lili Wang, Marco Allodi, Richard Mazuski, Po-Chieh Ting and our collaborators in the Park Group on the publication in Ultrafast Phenomena and Nanophotonics XXIV of their proceeding entitled "Biexcitons do not form in MoS2 monolayers from optical pumping at 6 K".
Congratulations to Lili Wang and Marco Allodi on having their paper entitled, "Quantum coherences reveal excited state dynamics in biophysical systems", published in Nature Reviews Chemistry.
Congratulations to Sara Massey, Po-Chieh Ting, Shu-Hao Yeh, Pete Dahlberg, Sara Sohail, Marco Allodi, and our collaborators in the Kais group and Hunter Group on having their paper entitled, "Orientational Dynamics of Transition Dipoles and Exciton Relaxation in LH2 from Ultrafast Two-Dimensional Anisotropy", published online in JPCL.
Congratulations to Shu-Hao Yeh, Marco Allodi and our collaborators in the Kais group on having their paper entitled,"Elucidation of near-resonance vibronic coherence lifetimes by nonadiabatic electronic-vibrational state character mixing" published in PNAS.
Congratulations to Marco Allodi, John Otto, Sara Sohail, Ryan Wood, Brian Rolczynski, Sara Massey, and Po-Chieh Ting as well as our collaborators in the Blankenship Group on having their paper entitled, "Redox Conditions Affect Ultrafast Exciton Transport in Photosynthetic Pigment-Protein Complexes", published in the Journal of Physical Chemistry Letters.
Congratulations to Pete Dahlberg, Po-Chieh Ting, Sara Massey, Marco Allodi and our collaborators in the Hunter Group on having their manuscript entitled, "Mapping the ultrafast flow of harvested solar energy in living photosynthetic cells" published in Nature Communications.
Congratulations to Sara Sohail, Pete Dahlberg, Marco Allodi, Sara Massey, Po-Chieh Ting and our collaborators in the Hunter Group on having their paper entitled, "Broad Manifold of Excitonic States in Light-Harvesting Complex 1 Promotes Efficient Unidirectional Energy Transfer in vivo", accepted to JCP as a Communication.
C&E News has covered our recent development of Optical Resonance Imaging by Marco Allodi, John Otto, Richard Mazuski, and Ryan Wood.
Congratulations to Marco Allodi on receiving a Beckman Postdoctoral Fellowship.
Congratulations to Marco Allodi, Pete Dahlberg, Richard Mazuski, Hunter Davis and John Otto on having their paper entitled, "Optical resonance imaging: An optical analog to MRI with sub-diffraction-limited capabilities" published in ACS Photonics
Welcome to Dr. Marco Allodi, a Yen Fellow in the Institute for Biophysical Dynamics, who is joining the group as a postdoctoral fellow.